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   = Peer-reviewed publications =
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= Peer-reviewed publications =
'''2016 (2)'''

 * Gwinner F, Boulday G, Vandiedonck C, Arnould M, Cardoso C, Nikolayeva I, Guitart-Pla O, Denis CV, Christophe OD, Beghain J, Tournier-Lasserve E, Schwikowski B (2016) [[https://www.ncbi.nlm.nih.gov/pubmed/27797778|Network-based analysis of omics data: The LEAN method.]] '''Bioinformatics'''

 * Loucoubar C, Grant AV, Bureau JF, Casademont I, Bar NA, Bar-Hen A, Diop M, Faye J, Sarr FD, Badiane A, Tall A, Trape JF, Cliquet F, Schwikowski B, Lathrop M, Paul RE, Sakuntabhai A (2016) [[https://www.ncbi.nlm.nih.gov/pubmed/27178992|Detecting multi-way epistasis in family-based association studies.]] '''Brief Bioinform'''


Peer-reviewed publications

2016 (2)

2015 (3)

2014 (2)

2013 (3)

2012 (4)

  • Vandenbogaert M, Hourdel V, Jardin-Mathé O, Bigeard J, Bonhomme L, Legros V, Hirt H, Schwikowski B, Pflieger D (2012) Automated phosphopeptide identification using multiple MS/MS fragmentation modes. Journal of Proteome Research Publication Date (Web): October 24, 2012

  • Nicolas P, Mader U, Dervyn E, Rochat T, Leduc A, Pigeonneau N, Bidnenko E, Marchadier E, Hoebeke M, Aymerich S, Becher D, Bisicchia P, Botella E, Delumeau O, Doherty G, Denham EL, Fogg MJ, Fromion V, Goelzer A, Hansen A, Hartig E, Harwood CR, Homuth G, Jarmer H, Jules M, Klipp E, Le Chat L, Lecointe F, Lewis P, Liebermeister W, March A, Mars RA, Nannapaneni P, Noone D, Pohl S, Rinn B, Rugheimer F, Sappa PK, Samson F, Schaffer M, Schwikowski B, Steil L, Stulke J, Wiegert T, Devine KM, Wilkinson AJ, van Dijl JM, Hecker M, Volker U, Bessieres P, Noirot P (2012) Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis. Science 335(6072): 1103-1106

  • Buescher JM, Liebermeister W, Jules M, Uhr M, Muntel J, Botella E, Hessling B, Kleijn RJ, Le Chat L, Lecointe F, Mader U, Nicolas P, Piersma S, Rugheimer F, Becher D, Bessieres P, Bidnenko E, Denham EL, Dervyn E, Devine KM, Doherty G, Drulhe S, Felicori L, Fogg MJ, Goelzer A, Hansen A, Harwood CR, Hecker M, Hubner S, Hultschig C, Jarmer H, Klipp E, Leduc A, Lewis P, Molina F, Noirot P, Peres S, Pigeonneau N, Pohl S, Rasmussen S, Rinn B, Schaffer M, Schnidder J, Schwikowski B, Van Dijl JM, Veiga P, Walsh S, Wilkinson AJ, Stelling J, Aymerich S, Sauer U (2012) Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism. Science 335(6072): 1099-1103

  • Li-Thiao-Te S, Schwikowski B (2012) Feature Detection with Controlled Error Rates in LC/MS Images. Journal of computational biology : a journal of computational molecular cell biology

2011 (3)

2010 (5)

2009 (2)

2008 (6)

2007 (12)

2006 (8)

2005 (4)

2004 (2)

Original Cytoscape reference